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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015920380.1_cds_XP_016469524.1_62065
CDS Infomation

[gene=LOC107791893] [db_xref=GeneID:107791893] [protein=DNA polymerase delta small subunit-like isoform X3] [protein_id=XP_016469524.1] [location=join(57759..57830,57972..58101,58920..59026,59164..59290,59511..59618,60366..60481,60579..60662,64428..64496,64579..64650,64754..64845,64913..65040,65416..65517,65583..65650,72699..72844,72963..72966)] [gbkey=CDS]
Sequence

ATGGTGGTAGCAATGGAAGTGGACTCAGAGAGCAACCTTCTCCAGCGAAAACAGTCCCTT
TACCATTCTTTGGATGAGAGTTTTGAGATAGGGAAGGAGGTATACAGGGGGCAGCAGTAC
AGTCAAATATATTATGCTAGGCTCCATTTGATGCGTACTCTCCTTTACTCTCTCCTTCCC
AATTGGAAACCCCATTTGCCTGTCTGTACTGTTCTGGGATTAGAGGAAGGCAAAGAATGC
ATTATAGTTGGGACACTCTACAAGCACATGAAGCTAAAACCTTCTGTTCTTGATGAGTAC
TCTAAAGAGAGATCTGCTGCACCGCTTGTACAACGTCATAACTTTACGCACCCAGATGAT
AATTTAGTTCTGGAAGATGAGAGCGGAAGAGTCAAACTAAGTGGCTCTGTTCTTTTGCCA
TCTACATATGTAACAGGTATGATTGCTGCATTGCATGGAAAAGAAACTAGTGCTGGTGAT
TTTTTGGTTGAAGATGTTCTAGAGGCTGGTCTACCACAGCAAATAGAGCGACCAATTGAC
TTAGGTGAAGATAAATATGTGGTTTTCGTATCTGGTTTGAGTGTTGGGAGAAGCTCTTCT
AATCCTCTCCAATTTCAACTTTTTGTTGATCACATCACTGGACATTTAGGAGACGTGAAG
GAACAAAATATTGCAGCTCAAATAGTTCAGGTTGTTATTGCTGGAAACTCTGTTGAAGTA
CCTCATGGACTTCTCAATGGACAGAATCTGGGTTCAAAGGACCAGTCTAGATTGTTTGAG
CCGATTAAAGAGCTTGATATTTTGTTGACGCAGATTGCAGCAAGTATACCTTTGGATATC
GTGCCAGGATCCAGTGATCCAGCAAATTTCGCCCTGCCACAGCAGCCTCTCCATAGATGC
CTGTTCCCTGGATCATCAGCTTATAACACTTTCAGATCTTGCACAAATCCACATTGCTTT
GAACTTGACAACATCAGGTTCCTAGGTACATCTGGTCAAAATATTGATGATCTTGGCAAG
TATTCTGAGGCAAACAGTAGTATTGAATTTATGGAGAGGACATTGAGGTGGAGACATCTA
GCACCAACAGCACCAAACACCCTTGGGTGCTATCCTTTCACTGATAAGGATCCTTTCTAT
GTTGAAACTTGTCCTCACGTTTATTTTGTGGGCAATCAAGATAAATTTGAAACTCGCTTG
ATAAAAGGATCAGAAGGGCAGATGGTCAGGCTTATTTGCATTCCCCGATTTGCAGATACT
GGAGTGGCAGTGGTGAGCGGCAGTGAGAAAACATCCGGGAAAGAAAACCCAGCCGAAACA
GTCGCCGTGCTTCAATTCCGGCGACCTTTTAGGGCTGTTTTTTCGTCAAAACCAATTTCC
ATCGGTGTTTCTTCCTTTCTTTTTTCGAATGATCGTGCTAGTTGA

Peptide Sequence

PEP ID

XP_016469524.1
PEP Infomation

PREDICTED: DNA polymerase delta small subunit-like isoform X3 [Nicotiana tabacum]
Sequence

MVVAMEVDSESNLLQRKQSLYHSLDESFEIGKEVYRGQQYSQIYYARLHLMRTLLYSLLP
NWKPHLPVCTVLGLEEGKECIIVGTLYKHMKLKPSVLDEYSKERSAAPLVQRHNFTHPDD
NLVLEDESGRVKLSGSVLLPSTYVTGMIAALHGKETSAGDFLVEDVLEAGLPQQIERPID
LGEDKYVVFVSGLSVGRSSSNPLQFQLFVDHITGHLGDVKEQNIAAQIVQVVIAGNSVEV
PHGLLNGQNLGSKDQSRLFEPIKELDILLTQIAASIPLDIVPGSSDPANFALPQQPLHRC
LFPGSSAYNTFRSCTNPHCFELDNIRFLGTSGQNIDDLGKYSEANSSIEFMERTLRWRHL
APTAPNTLGCYPFTDKDPFYVETCPHVYFVGNQDKFETRLIKGSEGQMVRLICIPRFADT
GVAVVSGSEKTSGKENPAETVAVLQFRRPFRAVFSSKPISIGVSSFLFSNDRAS

Transcript Sequence

Gene sequence data has not been registered.